partibrains.c

static char local_id[] = "$Id$";
/*
 * $Log$
 * Revision 1.18  2001/02/03 23:43:10  slevy
 *
 * Don't let "kira tree" hide "kira track" -- demand 3 chars!
 *
 * Revision 1.17  2001/02/03 16:49:42  slevy
 *
 * Update cookedcmap when "cment" changes cmap.
 *
 * Revision 1.16  2001/02/03 15:29:03  slevy
 *
 * Toss unused variable.
 *
 * Revision 1.15  2001/02/03 14:50:44  slevy
 *
 * Add "setgamma" (abbr. "setgam" or "cgam") command to adjust colors.
 * Add "kira tree {off|on|cross|tick} [tickscale]" subcommand
 * for showing tree structure of interacting groups.
 *
 * Revision 1.14  2001/01/31 17:11:54  slevy
 *
 * Ensure that, for starlab, clock is always in "continuous" mode.
 *
 * Revision 1.13  2001/01/31 17:07:12  slevy
 *
 * Add RCS Id and Log strings.
 *
 */

#define __USE_MISC	/* makes <math.h> define sqrtf() on GNU libc */

#include <stdio.h>
#include <stdlib.h>
#include <math.h>
#include <ctype.h>

#if !sgi && !defined(sqrtf)
# define sqrtf(x)  sqrt(x)	/* if no sqrtf() */
#endif

#undef isspace		/* hack for irix 6.5 back-compat */
#undef isdigit
#undef isalnum

#if unix
# include <unistd.h>
# include <sys/types.h>
# include <netinet/in.h>  /* for htonl */
# include <time.h>
# include <alloca.h>
# ifndef WORDS_BIGENDIAN
#  include "config.h"	/* for WORDS_BIGENDIAN */
# endif
#else /*WIN32*/
# include "winjunk.h"
# define WORDS_BIGENDIAN 0
#endif
#include <string.h>
#include <errno.h>


#if WORDS_BIGENDIAN
#define RGBALPHA(rgb, alpha)	((rgb) | (alpha))
#define RGBWHITE		0xFFFFFF00
#define	PACKRGBA(r,g,b,a)	((r)<<24 | (g)<<16 | (b)<<8 | (a))
#define	THRESHBIT		PACKRGBA(0,0,0,1)
#else
#define RGBALPHA(rgb, alpha)	((rgb) | ((alpha)<<24))
#define RGBWHITE		0x00FFFFFF
#define	PACKRGBA(r,g,b,a)	((a)<<24 | (b)<<16 | (g)<<8 | (r))
#define	THRESHBIT		PACKRGBA(0,0,0,1)
#endif

#if CAVE
# define  CAVEMENU  1
#endif

#include "geometry.h"
#include <GL/gl.h>

#if CAVEMENU
#include <cave_ogl.h>
#include "cavemenu.h"
#include "vd_util.h"
#define IFMENU(x)  (x)
#else
#define IFMENU(x)
#endif

#include "shmem.h"	/* NewN(), etc. */
#include "futil.h"

#include "specks.h"

#include "textures.h"
#include "findfile.h"
#include "partiviewc.h"
#include "sfont.h"

#include <sys/types.h>
#include <signal.h>

#ifdef sgi
#include <malloc.h>	/* for mallinfo(), amallinfo() */
#endif

#ifdef USE_KIRA
#include "kira_parti.h"
#endif

  /* Star Renderer (.sdb) structure -- from stardef.h */
typedef enum {ST_POINT, ST_BRIGHT_CLOUD ,ST_DARK_CLOUD, ST_BOTH_CLOUD, OFF} stype;

typedef struct {
        float  x, y, z;
        float  dx, dy, dz;
        float  magnitude, radius;
        float  opacity;
        int  num;
        unsigned short  color;
        unsigned char   group;
        unsigned char   type;
} db_star;

typedef  struct  hrec { float  t;  int  num;}  hrec_t;
typedef  struct  mrec { float  mass, x, y, z, vx, vy, vz, rho, temp, sfr, gasmass;
                 int  id, token;}  mrec_t;
  /* end Star Renderer */


#define VDOT( v1, v2 )  ( (v1)->x[0]*(v2)->x[0] + (v1)->x[1]*(v2)->x[1] + (v1)->x[2]*(v2)->x[2] )

#if CAVEMENU
int parti_menuwall, parti_menubox[4];

static MenuHead *pmenu = NULL;
static MenuHead *stubmenu = NULL;

struct ments {
  MenuEnt *alpha, *point, *poly, *label, *psize, *polysize, *fog;
  MenuEnt *step, *fwd, *lumvar, *slum, *colorvar, *where[4];
  MenuEnt *viewall, *setscale, *speed, *fspeed, *every;
  MenuEnt *seedata, *box, *boxlevel[12];
  MenuEnt *annot;
  MenuEnt *tknob[3];
  MenuEnt *menu;
} ment;

struct boxleveler {
  struct stuff *st;
  int level;
};

void set_tknob( float val, MenuEnt *me, void *st );
void set_psize( float psize, MenuEnt *me, void *st );
void set_polysize( float psize, MenuEnt *me, void *st );
void set_alpha( float alpha, MenuEnt *me, void *st );
void set_point( int on, MenuEnt *me, void *st );
void set_poly( int on, MenuEnt *me, void *st );
void set_label( int on, MenuEnt *me, void *st );

void set_step( float time0, MenuEnt *me, void *st );
void set_fwd( int fwd, MenuEnt *me, void *st );
void set_slum( float slum, MenuEnt *me, void *st );
void set_lumvar( int which, MenuEnt *me, void *st );
void set_colorvar( int which, MenuEnt *me, void *st );
void set_seedata( int which, MenuEnt *me, void *st );
void set_speed( float speed, MenuEnt *me, void *st );
void set_fspeed( float fspeed, MenuEnt *me, void *st );
void set_every( float every, MenuEnt *me, void *st );
void set_scale( float logscale, MenuEnt *me, void *st );
void set_viewall( int all, MenuEnt *me, void *st );
void set_allboxes( int on, MenuEnt *me, void *st );
void set_boxlevel( int on, MenuEnt *me, void *bleveler );
void set_where( int unused, MenuEnt *me, void *st );
void set_menu( int on, MenuEnt *me, void *st );
#endif /*CAVEMENU*/

static int defcmap[] = {
  0x11eeee00,
  0x1106ee00, 0x120ea900, 0x1316ce00, 0x1520d500, 0x172ece00, 0x193fcb00,
  0x1c54b400, 0x206da400, 0x24889200, 0x2aa58400, 0x33c07600, 0x3ed96a00,
  0x4eed6100, 0x63fa5a00, 0x7efe5100, 0x99fb4c00, 0xafef4700, 0xc0dc4000,
  0xcbc33900, 0xd4a83000, 0xda8b2900, 0xdf702700, 0xe2572500, 0xe5411700,
  0xe82f1000, 0xea211500, 0xeb171400, 0xed0f1200, 0xee0aee00,
  0xffffff00,
};

int orientboxcolor = PACKRGBA( 0xff, 0xff, 0, 0xff );

void specks_read( struct stuff **stp, char *fname );
void specks_read_boxes( struct stuff *st, char *fname, int timestep );
int  specks_add_box( struct stuff *st, struct AMRbox *box, int timestep );
int  specks_purge( void *vstuff, int nbytes, void *aarena );
int  specks_count( struct specklist *head );
int  specks_gobox( struct stuff *st, int boxno, int argcrest, char *argvrest[] );
int specks_cookcment( struct stuff *st, int cment );
void specks_rgbremap( struct stuff *st );

void specks_reupdate( struct stuff *st, struct specklist *sl );
struct specklist **specks_find_annotation( struct stuff *, struct specklist **);
void specks_set_current_annotation( struct stuff *st, char *annotation );
void specks_add_annotation( struct stuff *st, char *annotation, int timestep );
void specks_timerange( struct stuff *st, double *tminp, double *tmaxp );

extern int getbool( char *str, int defval );
extern double getfloat( char *str, double defval );

static char separ[] = " \t\n";

void strncpyt( char *dst, char *src, int dstsize ) {
  int len = strlen(src);
  if(len >= dstsize) len = dstsize-1;
  memcpy(dst, src, len);
  dst[len] = '\0';
} 

#ifdef sgi
static float defgamma = 1.0;
#else
static float defgamma = 2.5;
#endif

struct stuff *
specks_init( int argc, char *argv[] )
{
  int i;
  struct stuff *st = NewN( struct stuff, 1 );
  char *menuopt;

  memset(st, 0, sizeof(*st));
  st->spacescale = 1.0;
  st->fog = 0;
  st->psize = 1;
  st->alpha = .5;
  st->gamma = defgamma;
  st->rgbgamma[0] = st->rgbgamma[1] = st->rgbgamma[2] = 1.0;
  st->rgbright[0] = st->rgbright[1] = st->rgbright[2] = 1.0;
  specks_rgbremap( st );
  st->useme = 1;
  st->usepoly = 0;
  st->usepoint = 1;
  st->usetext = 1;
  st->usetextaxes = 1;
  st->usetextures = 1;
  st->useboxes = 1;
  st->polysizevar = -1;
  st->polyarea = 0;
  st->polyorivar0 = -1;
  st->texturevar = -1;
  st->txscale = .5;
  st->boxlabels = 0;
  st->boxlabelscale = 1.0;
  st->boxlevelmask = ~0;	/* all levels on */
  st->boxaxes = 0;		/* boxes don't show orientation markers */
  st->goboxscale = 1.0;
  st->textsize = .05;
  st->npolygon = 11;
  st->subsample = 1;
  st->everycomp = 1;

  st->menudemandfps = 4.0;

  st->pfaint = .05;	/* params for "fast" point-drawing */
  st->plarge = 10;
  st->polymin = .5;	/* don't draw polygons if smaller (pixels) */
  st->polymax = 2048;	/* don't allow polygons to get bigger than this (pixels) */
  st->textmin = 2;	/* replace labels with line-segments if smaller (pixels) */
  st->ntextures = 0;
  st->textures = NULL;

  st->fade = F_SPHERICAL;
  st->fadeknee1 = 10.0;
  st->fadeknee2 = 1.0;
  st->knee2steep = 1.0;

  st->gscale = 1.;
  st->gtrans.x[0] = st->gtrans.x[1] = st->gtrans.x[2] = 0;
  st->objTo2w = Tidentity;

  st->ncmap = st->boxncmap = COUNT(defcmap);
  st->cmap = NewN(int, COUNT(defcmap));
  st->cookedcmap = NewN(int, COUNT(defcmap));
  st->boxcmap = NewN(int, COUNT(defcmap));
  for(i = 0; i < COUNT(defcmap); i++) {
    st->cmap[i] = st->boxcmap[i] = htonl(defcmap[i]);
    st->cookedcmap[i] = specks_cookcment( st, st->cmap[i] );
  }

  st->sizedby = 0;
  st->coloredby = 1;
  st->sizeseq = st->colorseq = st->threshseq = 0;
  st->trueradius = 0;
  st->sdbvars = shmstrdup( "mcr" );

  st->nghosts = 0;

  st->ntimes = 0;
  st->ndata = 0;
  st->curtime = 0;
  st->curdata = 0;
  st->datatime = 0;
  st->usertrange = 0;
  st->utmin = -HUGE;
  st->utmax = HUGE;
  st->utwrap = 0.1;
  st->sl = NULL;

  st->boxes = NULL;
  st->boxlevels = 0;
  st->boxlinewidth = 0.75;

  st->depthsort = 0;

  st->clk = NewN(SClock, 1);
  clock_init(st->clk);
  clock_set_running(st->clk, 1);

  memset(st->anima, 0, sizeof(st->anima));
  memset(st->annot, 0, sizeof(st->annot));
  memset(st->datafile, 0, sizeof(st->datafile));
  memset(st->fname, 0, sizeof(st->fname));


#if CAVE
  shmrecycler( specks_purge, st );
#endif

  for(i = 1; i < argc; i++)
    specks_read( &st, argv[i] );

#if CAVEMENU
  menu_preinit();

  pmenu = menu_create( .05, .95 );
  menu_setfont( pmenu, font_small );

  ment.annot = menu_addentry( pmenu, " ", NULL, NULL );
  menu_addentry( pmenu, " ", NULL, NULL );

  menuopt = getenv("PARTIMENU");
  if(menuopt == NULL) menuopt = "label";

  if(strstr(menuopt, "survey")) {	/* SC99DEMO star-formation survey */
    for(i = 0; i < 3; i++) {
	struct boxleveler *tb = NewN( struct boxleveler, 1 );
	tb->st = st;
	tb->level = i;
	ment.tknob[i] = menu_addknob( pmenu, NULL, set_tknob, 0, 0,4, tb );
    }
  }
  menu_addentry( pmenu, " ", NULL, NULL );

  ment.psize = menu_addknob( pmenu, NULL, set_psize, st->psize, 0.1,20, st );
  ment.slum = menu_addknob( pmenu, NULL, set_slum,
		st->vdesc[st->curdata][st->sizedby].lum, .1, 10, st );
  ment.lumvar = menu_addtoggle( pmenu, NULL, set_lumvar, st->sizedby, MAXVAL, st );
  ment.colorvar = menu_addtoggle( pmenu, NULL, set_colorvar, st->coloredby, MAXVAL, st );
  ment.seedata = menu_addtoggle( pmenu, NULL, set_seedata, st->curdata, 2, st );
  if(strstr(menuopt, "label"))
    ment.label = menu_addtoggle( pmenu, NULL, set_label, st->usetext, 2, st );
  if(strstr(menuopt, "poly"))
    ment.poly = menu_addtoggle( pmenu, NULL, set_poly, st->usepoly, 2, st );
  menu_addentry( pmenu, " ", NULL, NULL );	/* spacer */

#ifndef STATIC_SPECKS
  ment.fspeed = menu_addknob( pmenu, NULL, set_fspeed, clock_speed(st->clk), 0, 5, st );
  ment.speed = menu_addknob( pmenu, NULL, set_speed, clock_speed(st->clk), .5, 5, st );
  ment.step = menu_addknob( pmenu, NULL, set_step, clock_time(st->clk), 0, 10, st );
  ment.fwd = menu_addtoggle( pmenu, NULL, set_fwd, clock_fwd(st->clk), 2, st );
#endif

#ifndef NO_WHERE
  ment.where[0] = menu_addentry( pmenu, "", NULL, NULL );
  ment.where[1] = menu_addentry( pmenu, "", NULL, NULL );
  ment.where[2] = menu_addentry( pmenu, "", NULL, NULL );
  ment.where[3] = menu_addentry( pmenu, "", NULL, NULL );
#endif

  ment.every = menu_addknob( pmenu, NULL, set_every, st->subsample, 1, 10, st );

  menu_addentry( pmenu, " ", NULL, NULL );

  ment.setscale = menu_addknob( pmenu, NULL, set_scale, 0., -4., 1., st );
  if(strstr(menuopt, "viewall"))
    ment.viewall = menu_addtoggle( pmenu, NULL, set_viewall, 0, 2, st );

  menu_addentry( pmenu, " ", NULL, NULL );

  ment.box = menu_addtoggle( pmenu, NULL, set_allboxes, st->useboxes, 3, st );
  menu_addentry( pmenu, " ", NULL, NULL );
  {
    struct boxleveler *blev = NewN( struct boxleveler, COUNT(ment.boxlevel) );
    for(i = 0; i < COUNT(ment.boxlevel); i++) {
	blev[i].st = st;
	blev[i].level = i;
	ment.boxlevel[i] = menu_addtoggle( pmenu, NULL, set_boxlevel, 1, 2,
		&blev[i] );
    }
  }

  ment.menu = menu_addtoggle( pmenu, "<Menu>", set_menu, 0, 2, st );
  menu_addentry( pmenu, " ", NULL, NULL );


  stubmenu = menu_create( .05, .15 );
  menu_addtoggle( stubmenu, "<Menu>", set_menu, 0, 2, st );
  menu_sethidden( stubmenu, 1 );
#endif /*NOCAVE*/

  return st;
}

#if CAVEMENU
void specks_refresh_menu(struct stuff *st)
{
  int i;
  int empty = st->ntimes == 0 && st->sl == NULL;

#if MENU_IN_PPR
  menu_check( pmenu, pmenu->cavewall );
  menu_check( stubmenu, stubmenu->cavewall );

#endif
  menu_sethidden( pmenu, st->hidemenu || empty );
  menu_sethidden( stubmenu, st->hidemenu<=0 || empty );

  if(st->vdcmd[0] != '\0') {
    VIDI_queue_commandstr( st->vdcmd );
    st->vdcmd[0] = '\0';
  }
  set_psize( st->psize, ment.psize, st );
  set_lumvar( st->sizedby, ment.lumvar, st );
  set_colorvar( st->coloredby, ment.colorvar, st );
  set_slum( st->vdesc[st->curdata][st->sizedby].lum, ment.slum, st );
  set_every( st->subsample, ment.every, st );
  set_scale( ment.setscale->val, ment.setscale, st );
  if(ment.label) set_label( st->usetext, ment.label, st );
  if(ment.poly) set_poly( st->usepoly, ment.poly, st );
  if(ment.annot)
    menu_settitle( ment.annot, st->annotation ? st->annotation : " " );
  if(st->ntimes > 1) {
    menu_setknobrange( ment.step, 0, st->ntimes-1 );
    set_fwd( st->timefwd, ment.fwd, st );
    set_step( st->time0, ment.step, st );
    set_speed( clock_speed(st->clk), ment.speed, st );
  } else {
    menu_settitle( ment.fwd, "" );
    menu_settitle( ment.step, "" );
    menu_settitle( ment.speed, "" );
    if(ment.viewall)
      menu_settitle( ment.viewall, "" ); /* no need to "view peak", right? */
  }
  if(st->ndata > 1) {
    set_seedata( st->curdata, ment.seedata, st );
  } else {
    menu_settitle( ment.seedata, "" );
  }
  if(st->boxlevels > 0) {
    set_allboxes( st->useboxes, ment.box, st );
  } else {
    menu_settitle( ment.box, "" );
  }

  if(ment.tknob[0])	/* if SC99DEMO, i.e. if PARTIMENU includes "survey" */
    for(i = 0; i < 3; i++)
      set_tknob( ment.tknob[i]->val, ment.tknob[i], ment.tknob[i]->data );


#ifndef NO_WHERE
  for(i = 0; i < COUNT(ment.where) && ment.where[i] != NULL; i++)
    set_where( i, ment.where[i], st );
#endif

  /* Publicize our menu location so other apps -- Matt's vtk AMR code --
   * can avoid interacting if user's wand points there.
   */
  parti_menuwall = pmenu->cavewall;

  parti_menubox[0] = pmenu->x0 * pmenu->wallxpix;
  parti_menubox[1] = ((pmenu->y0 < pmenu->y1) ? pmenu->y0 : pmenu->y1)
			* pmenu->wallypix;

  parti_menubox[2] = pmenu->x1 * pmenu->wallxpix;
  parti_menubox[3] = ((pmenu->y0 > pmenu->y1) ? pmenu->y0 : pmenu->y1)
			* pmenu->wallypix;

}

void specks_evoke_menu( struct stuff *st ) {
  menu_evoke( pmenu );	/* evoke any callbacks */
}

#endif /*CAVEMENU*/

void specks_rethresh( struct stuff *st, struct specklist *sl, int by )
{
  struct valdesc *vd;
  int i;
  int curdata = st->curdata;
  int nel = sl->nspecks;
  float cmin, cmax, normal;
  int ncmap = st->ncmap;
  int index;
  int min, max;
  float threshmin = st->thresh[0], threshmax = st->thresh[1];
  struct speck *p = sl->specks;

  sl->threshseq = st->threshseq;

  if(sl->text != NULL)	/* specklists with labels shouldn't be thresholded */
    return;

  if(curdata >= st->ndata)
    curdata = 0;

  min = (SMALLSPECKSIZE(by)>=sl->bytesperspeck) ? 0 : st->usethresh&P_THRESHMIN;
  max = (SMALLSPECKSIZE(by)>=sl->bytesperspeck) ? 0 : st->usethresh&P_THRESHMAX;

  for(i = 0, p = sl->specks; i < sl->nspecks; i++, p = NextSpeck( p, sl, 1 )) {
    p->rgba = (min&&p->val[by]<threshmin) || (max&&p->val[by]>threshmax)
	     ? p->rgba | THRESHBIT : p->rgba & ~THRESHBIT;
  }
}

int specks_cookcment( struct stuff *st, int cment )
{
    unsigned char crgba[4];
    memcpy(crgba, &cment, 4);		/* XXX 64-bit bug? */
    return (cment & ~RGBWHITE) |
	   PACKRGBA(
		st->rgbmap[0][crgba[0]],
		st->rgbmap[1][crgba[1]],
		st->rgbmap[2][crgba[2]],
		0 );
}

void specks_rgbremap( struct stuff *st )
{
  int i, k;
  for(i = 0; i < 256; i++) {
    float t = (float)i / 256;
    float v = 255.99f * pow(t, 1/st->rgbgamma[0]);
    k = (int) (st->rgbright[0] * v);
    st->rgbmap[0][i] = (k <= 0) ? 0 : (k > 255) ? 255 : k;
    if(st->rgbgamma[0] != st->rgbgamma[1])
        v = 255.99f * pow(t, 1/st->rgbgamma[1]);
    k = (int) (st->rgbright[1] * v);
    st->rgbmap[1][i] = (k <= 0) ? 0 : (k > 255) ? 255 : k;
    if(st->rgbgamma[1] != st->rgbgamma[2])
        v = 255.99f * pow(t, 1/st->rgbgamma[2]);
    k = (int) (st->rgbright[2] * v);
    st->rgbmap[2][i] = (k <= 0) ? 0 : (k > 255) ? 255 : k;
  }
  /* remake colormap too */
  for(i = 0; i < st->ncmap; i++)
    st->cookedcmap[i] = specks_cookcment( st, st->cmap[i] );
  st->colorseq++;
}


void specks_recolor( struct stuff *st, struct specklist *sl, int by )
{
  struct valdesc *vd;
  int i;
  int curdata = st->curdata;
  int nel = sl->nspecks;
  struct speck *sp = sl->specks;
  float cmin, cmax, normal;
  int ncmap = st->ncmap;
  int index;
  int rgb565;
  unsigned char (*rgbmap)[256];

  sl->coloredby = by;
  sl->colorseq = st->colorseq;

  if(sl->text != NULL)	/* specklists with labels shouldn't be recolored */
    return;

  if(curdata >= st->ndata)
    curdata = 0;

  if(by == CONSTVAL) {
    /* Hack -- color by given RGB value */
    char crgba[4];
    int r, g, b, rgba;
    vd = &st->vdesc[curdata][CONSTVAL];
    r = (vd->cmin<=0) ? 0 : vd->cmin>=1 ? 255 : (int)(255.99f * vd->cmin);
    g = (vd->cmax<=0) ? 0 : vd->cmax>=1 ? 255 : (int)(255.99f * vd->cmax);
    b = (vd->mean<=0) ? 0 : vd->mean>=1 ? 255 : (int)(255.99f * vd->mean);
    crgba[0] = st->rgbmap[0][r];
    crgba[1] = st->rgbmap[0][g];
    crgba[2] = st->rgbmap[0][b];
    crgba[3] = 0;
    rgba = *(int *)&crgba[0];	/* XXX 64-bit bug? */
    for(i = 0; i < nel; i++, sp = NextSpeck(sp, sl, 1)) {
	sp->rgba = rgba | (sp->rgba & THRESHBIT);
    }
    return; 
  }

  if(by >= MAXVAL || by < 0 || SMALLSPECKSIZE(by) > sl->bytesperspeck)
	by = 0;
	
  vd = &st->vdesc[curdata][by];


  cmin = vd->cmin, cmax = vd->cmax;
  if(cmin == cmax && cmin == 0 || (vd->call && !vd->cexact)) {
    vd->cmin = cmin = vd->min;
    vd->cmax = cmax = vd->max;
  }

  normal = (cmax != cmin && ncmap>2) ? (ncmap-2)/(cmax - cmin) : 0;
  rgb565 = !strcmp(vd->name, "rgb565") || !strcmp(vd->name, "colors565");

  /* cexact field means:
   *   0 (default): scale data range to cmap index 1..ncmap-2;
   *		    use 0 and ncmap-1 for low- and high- out-of-range values.
   *
   *   1 ("exact"): use data value as literal colormap index, 0..ncmap-1.
   */
  rgbmap = &st->rgbmap[0];
  for(i = 0; i < nel; i++, sp = NextSpeck(sp, sl, 1)) {
    if(rgb565) {
	index = sp->val[by];
	sp->rgba = PACKRGBA(
			rgbmap[0][(index&0xF800)>>(11-(8-5))],
			rgbmap[1][(index&0x07E0)>>(5-(8-6))],
			rgbmap[2][(index&0x1F)<<(8-5)],
			0 )
		  | (sp->rgba & THRESHBIT);
    } else {
	index = vd->cexact  ?   sp->val[by] + cmin
			    :  (sp->val[by] - cmin) * normal + 1;

	if(index < 0) index = 0;
	else if(index >= ncmap) index = ncmap-1;

	sp->rgba = st->cookedcmap[index] | (sp->rgba & THRESHBIT);
    }
  }
}

void specks_resize( struct stuff *st, struct specklist *sl, int by )
{
  int i;
  int nel = sl->nspecks;
  struct speck *sp = sl->specks;
  int curdata = st->curdata;
  struct valdesc *vd;
  float lmin, lmax, normal;

  sl->sizedby = by;
  sl->sizeseq = st->sizeseq;

  if(sl->text != NULL) /* specklists with labels shouldn't be resized */
    return;

  if(curdata < 0 || curdata >= st->ndata)
    curdata = 0;

  if(by == CONSTVAL) {
    vd = &st->vdesc[curdata][CONSTVAL];
    for(i = 0; i < nel; i++, sp = NextSpeck(sp, sl, 1))
	sp->size = vd->lmin;
    return;
  }

  if(by < 0 || by >= MAXVAL)
    by = 0;

  vd = &st->vdesc[curdata][by];

  lmin = vd->lmin, lmax = vd->lmax;
  if(lmin == lmax && lmin == 0 || vd->lall) {
	vd->lmin = lmin = vd->min;
	vd->lmax = lmax = vd->max;
  }

  if(lmax == lmin)
    normal = 1;
  else
    normal = 1 / (lmax - lmin);

  for(i = 0; i < nel; i++, sp = NextSpeck(sp, sl, 1))
    sp->size = (sp->val[by] - lmin) * normal;
}

void specks_datawait(struct stuff *st) {
#if USE_IEEEIO
    while(st->fetching && st->fetchpid > 0
	    && st->fetchtime == st->curtime
	    && st->fetchdata == st->curdata)
	usleep(50000);
#endif
}

#ifdef USE_IEEEIO

void specks_ieee_server( void *vst ) {
  struct stuff *st = (struct stuff *)vst;
  struct specklist *sl;

  prctl(PR_TERMCHILD);	/* Die when parent dies */
  /* Await a request */
  for(;;) {
    time_t then;
    while(st->fetching <= 0)
	sginap(5);
    then = time(NULL);
    sl = specks_ieee_read_timestep( st, st->subsample,
				st->fetchdata, st->fetchtime );
    if(then + 5 < time(NULL))
	msg("... got %x (%d particles) from %s", sl, specks_count(sl),
		st->fname[st->fetchdata][st->fetchtime]);
    if(st->curtime == st->fetchtime && st->curdata == st->fetchdata
			&& sl != NULL) {
	st->sl = sl;
	parti_redraw();
    }
    st->fetching = 0;
  }
}

#endif /*USE_IEEEIO*/

void specks_set_speed( struct stuff *st, double newspeed ) {
  clock_set_speed( st->clk, newspeed );
  parti_set_speed( st, newspeed );
}

void specks_set_fspeed( struct stuff *st, double newspeed ) {
  /* ignore it! */
  /* or maybe use fspeed to specify finite clock resolution */
}

void specks_shift_ghosts( struct stuff *st ) {
  int i;
  struct specklist **slp =
	specks_timespecksptr( st, 0,
		st->nghosts > 0 ? st->nghosts-1 : 0 );
  if(slp && *slp)
    specks_discard( st, slp );
  for(i = st->nghosts; --i > 0; ) {
    slp = specks_timespecksptr( st, 0, st->nghosts );
    *slp = slp[-1];
  }
  *specks_timespecksptr( st, 0, 0 ) = NULL;
}

void specks_set_timestep( struct stuff *st )
{
  struct specklist *sl = st->sl;
  struct specklist **slp;
  double realtime, tmin, tmax;
  int timestep;

  st->used++;

  specks_timerange( st, &tmin, &tmax );
  if(st->usertrange) {
    if(tmin < st->utmin) tmin = st->utmin;
    if(tmax > st->utmax) tmax = st->utmax;
  }
  clock_set_range( st->clk, tmin, tmax, st->utwrap );
  realtime = clock_time( st->clk );
  timestep = realtime;

  if(st->dyndata && st->dyndatafunc) {
    struct specklist *sl;

    if(realtime == st->currealtime && st->sl != NULL && st->sl->used >= 0)
	return;
    sl = (*st->dyndatafunc)(st, realtime);
    sl->used = 1;
    st->currealtime = realtime;
    st->curtime = timestep;

    /* Possibly retain old snapshots -- up to st->ntimes of them! */
    /* In any case, discard previous array */
    specks_shift_ghosts( st );

    slp = specks_timespecksptr( st, 0, 0 );
    *slp = st->sl = sl;
    parti_set_timestep( st, realtime );
    /* Hack for kira-parti dynamic data */
    if(sl) {
	if(st->coloredby >= 0 && st->coloredby < CONSTVAL)
	    st->colorseq++;
	if(st->sizedby >= 0 && st->coloredby < CONSTVAL)
	    st->sizeseq++;
	if(st->threshvar >= 0)
	    st->threshseq++;
    }
    return;
  }

  if(timestep >= st->ntimes) timestep = st->ntimes - 1;
  if(timestep < 0) timestep = 0;

  slp = specks_timespecksptr( st, st->curdata, timestep );
  if(*slp != NULL && (*slp)->subsampled > st->subsample) {
    specks_discard( st, slp );
  }

  sl = *slp;

#ifdef USE_IEEEIO

  if(sl == NULL && (st->fetching == 0 || st->datasync)
		&& st->curdata>=0 && st->curdata<st->ndata
		&& st->datafile[st->curdata] != NULL
		&& timestep>=0 && timestep<st->ntimes
		&& st->datafile[st->curdata][timestep] != NULL) {

    st->fetchdata = st->curdata;
    st->fetchtime = timestep;

    if(getenv("NO_SPROC") || st->datasync) {
	sl = specks_ieee_read_timestep( st, st->subsample,
                                st->fetchdata, st->fetchtime );
        msg("Got %x (%d particles) from %s  (d%d t%d)\n",
		sl, specks_count(sl), st->fname[st->fetchdata][st->fetchtime],
		st->fetchdata, st->fetchtime);

    } else {
	st->fetching = 1;

	if(st->fetchpid <= 0) {
	    st->fetchpid = sproc( specks_ieee_server, PR_SADDR|PR_SFDS, st );
	    if(st->fetchpid < 0)
		perror("sproc");
	}
    }
  }

  if(st->fetchpid > 0) {
    if(kill(st->fetchpid, 0) < 0) {
	perror("specks server vanished: kill -0");
	st->fetching = 0;
	st->fetchpid = 0;
    }
  }
#endif /*USE_IEEEIO*/

  if(sl == NULL && !(st->boxtimes>timestep && st->boxes[timestep]!=NULL))
    return;
  st->sl = sl;   /* st->sl <= anima[][] */
  st->curtime = timestep;
  st->currealtime = timestep;
#if !CAVEMENU
  st->frame_time = st->curtime;	/* if non-CAVE, we have no frame-function */
#endif

  specks_set_current_annotation( st, st->annot[st->curdata][st->curtime]
		? st->annot[st->curdata][st->curtime]->text : NULL );
  parti_set_timestep( st, timestep );

}

void specks_set_current_annotation( struct stuff *st, char *annotation )
{
  st->annotation = annotation;
#ifdef CAVEMENU
  if(ment.annot)
    menu_settitle( ment.annot, st->annotation ? st->annotation : "" );
#endif
}

void specks_add_annotation( struct stuff *st, char *annotation, int timestep )
{
  struct specklist *sl, **slp;
  int curtime = (timestep < 0) ? st->curtime : timestep;

  if(annotation == NULL) annotation = "";

  specks_timespecksptr( st, st->curdata, curtime );
  if(curtime >= st->ntimes) curtime = 0;
  slp = &st->annot[st->curdata][curtime];
  if((sl = *slp) == NULL) {
    sl = *slp = NewN( struct specklist, 1 );
    memset(*slp, 0, sizeof(**slp));
  } else if(sl->text) {
    Free(sl->text);
  }
  sl->text = NewN( char, strlen(annotation)+1 );
  strcpy( sl->text, annotation );
}


#if !WORDS_BIGENDIAN
void starswap(db_star *st) {
  int i, *wp;
  /* byte-swap x,y,z, dx,dy,dz, magnitude,radius,opacity fields (32-bit float),
   * 		num (32-bit int),
   *		color (16-bit short).
   * group and type fields shouldn't need swapping,
   * assuming the compiler packs bytes into a word in increasing
   * address order.  Seems safe.
   */
  for(i = 0, wp = (int *)st; i < 10; i++)
    wp[i] = htonl(wp[i]);
  st->color = htons(st->color);
}
#endif /*!WORDS_BIGENDIAN*/

void specks_read_sdb( struct stuff *st, char *sdbfname, int timestep )
{
  FILE *inf = fopen(sdbfname, "r");
  long flen;
  int nspecks, i;
  float min[MAXVAL], max[MAXVAL], sum[MAXVAL];
  struct specklist *sl, **slp;
  register struct speck *sp;
  int dfltvars = (strcmp(st->sdbvars, "mcr") == 0);
  int nvars = strlen(st->sdbvars);
  int needswap = (htonl(1) != 1);

  if(inf == NULL) {
    msg("sdb: %s: cannot open: %s", sdbfname, strerror(errno));
    return;
  }
  /* Just measure file size */
  errno = 0;
  fseek(inf, 0, SEEK_END);
  flen = ftell(inf);
  if(flen == -1 || flen == 0) {
    msg("sdb: %s: can't measure length of file: %s", sdbfname, strerror(errno));

    return;
  }
  nspecks = (flen / sizeof(db_star));

  if(nspecks <= 0) {
    msg("sdb: %s: ignoring empty sdb file", sdbfname);
    return;
  }
  
  sl = NewN(struct specklist, 1);
  memset(sl, 0, sizeof(*sl));
  
  sl->bytesperspeck = SMALLSPECKSIZE( nvars );
  if(nvars > MAXVAL) nvars = MAXVAL;

  sl->scaledby = st->spacescale;
  sp = NewNSpeck(sl, nspecks);
  sl->specks = sp;

  fseek(inf, 0, SEEK_SET);
  for(i = 0; i < nspecks; i++, sp = NextSpeck(sp, sl, 1)) {
    db_star star;
    char *cp;
    int k;
    float *vp;
    if(fread(&star, sizeof(star), 1, inf) <= 0)
	break;
#if !WORDS_BIGENDIAN
    starswap(&star);
#endif
    sp->p.x[0] = star.x * sl->scaledby;
    sp->p.x[1] = star.y * sl->scaledby;
    sp->p.x[2] = star.z * sl->scaledby;
    if(dfltvars) {
	sp->val[0] = exp((-18-star.magnitude)*.921/*log(100)/5*/);
	sp->val[1] = star.color;
	sp->val[2] = star.radius;
    } else {
	for(vp = &sp->val[0], cp = st->sdbvars; *cp; cp++, vp++) {
	    switch(*cp) {
	    case 'm': *vp = exp((-18-star.magnitude)*.921/*log(100)/5*/); break;
	    case 'M': *vp = star.magnitude; break;
	    case 'c': *vp = star.color; break;
	    case 'r': *vp = star.radius; break;
	    case 'o': *vp = star.opacity; break;
	    case 'g': *vp = star.group; break;
	    case 't': *vp = star.type; break;
	    case 'x': *vp = star.dx; break;
	    case 'y': *vp = star.dy; break;
	    case 'z': *vp = star.dz; break;
	    case 'S': *vp = sqrt(star.dx*star.dx + star.dy*star.dy + star.dz*star.dz); break;
	    case 'n': *vp = star.num; break;
	    default: *vp = 1; break;
	    }
	}
    }

    if(i == 0) {
	for(k = 0; k < nvars; k++)
	    sum[k] = min[k] = max[k] = sp->val[k];
    } else {
	for(k = 0; k < nvars; k++) {
	    if(min[k] > sp->val[k]) min[k] = sp->val[k];
	    else if(max[k] < sp->val[k]) max[k] = sp->val[k];
	    sum[k] += sp->val[k];
	}
    }